Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ISL2Insulin gene enhancer protein ISL-3. (364 aa)    
Predicted Functional Partners:
LHX3
LIM homeobox 3.
    
 0.936
LOC115006652
LIM domain-binding protein 1.
    
 0.869
LOC115014620
LIM domain-binding protein 2.
    
 0.869
LOC115020520
LIM domain-binding protein 1-like.
    
 0.869
nkx2-5
NK2 homeobox 5.
    
 0.807
tbx20
T-box transcription factor 20.
   
 0.788
znf511
Zinc finger protein 511.
    
   0.762
idi1
Isopentenyl-diphosphate delta isomerase 1.
    
   0.718
gata4
GATA binding protein 4.
    
 0.694
ascl1
Achaete-scute family bHLH transcription factor 1.
    
 0.688
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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