Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115007374Insulin-like growth factor-binding protein 3. (293 aa)    
Predicted Functional Partners:
igf1
Insulin like growth factor 1.
     
 0.919
IGFBP3
Insulin-like growth factor-binding protein 3.
  
  
 
0.902
LOC115020429
Insulin-like growth factor I.
     
  0.900
igf2
Insulin like growth factor 2.
   
 0.785
LOC115017159
Growth hormone receptor-like.
      
 0.575
ptgs2
Prostaglandin-endoperoxide synthase 2.
      
 0.516
LOC115003607
Proto-oncogene c-Fos-like.
      
 0.472
LOC115006869
Vitellogenin-like.
   
 
 0.468
fst
Follistatin.
      
 0.449
ostm1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.446
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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