Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115013996Apical junction component 1 homolog. (1066 aa)    
Predicted Functional Partners:
LOC115013574
Calnexin-like.
    
 
 0.868
tmed2
Transmembrane p24 trafficking protein 2.
   
 
 0.827
copb2
Coatomer protein complex subunit beta 2.
   
 
 0.781
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
   0.730
tmed10
Transmembrane p24 trafficking protein 10.
   
 
 0.717
surf4
Surfeit 4.
   
 
 0.701
LOC115012493
ER lumen protein-retaining receptor 2.
   
 
 0.681
kdelr3
KDEL endoplasmic reticulum protein retention receptor 3.
   
 
 0.681
LOC115024957
ER lumen protein-retaining receptor 2.
   
 
 0.681
atp5po
ATP synthase peripheral stalk subunit OSCP.
    
   0.680
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.