Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSCGOP00000012229Spalt-like transcription factor 2. (1208 aa)    
Predicted Functional Partners:
bsx
Brain specific homeobox.
   
 0.668
LOC115022964
Transcriptional repressor p66 alpha-like.
    
 0.588
gatad2a
GATA zinc finger domain containing 2A.
    
 0.588
gatad2b
GATA zinc finger domain containing 2B.
    
 0.588
wdr73
WD repeat domain 73.
    
  0.574
LOC115027462
Histone-binding protein RBBP4.
    
  0.574
RBBP4
Histone-binding protein RBBP4-like.
    
  0.574
LOC115026072
Histone-binding protein RBBP7.
    
  0.574
crbn
Cereblon.
    
 
 0.564
mta3
Metastasis associated 1 family member 3.
    
  0.563
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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