Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115006292Tetraspanin-3-like. (253 aa)    
Predicted Functional Partners:
abcg8
ATP binding cassette subfamily G member 8.
    
   0.791
gadd45gip1
GADD45G interacting protein 1.
      
 0.665
siva1
SIVA1 apoptosis inducing factor.
      
 0.665
rcn2
Reticulocalbin 2.
   
  
 0.587
LOC115008414
CD9 antigen-like.
    
 
 0.558
LOC115010785
CD9 antigen-like.
    
 
 0.558
tm7sf3
Transmembrane 7 superfamily member 3.
      
 0.539
igsf8
Immunoglobulin superfamily member 8.
    
 
 0.507
LOC115010463
Syntenin-1-like.
    
 0.456
LOC115015503
Apolipoprotein Eb-like.
      
 0.446
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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