Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115005394neuromedin-B-like. (135 aa)    
Predicted Functional Partners:
LOC115026250
Gastrin-releasing peptide receptor-like.
    
 0.973
LOC115025783
Gastrin-releasing peptide receptor-like.
    
 0.973
ENSCGOP00000030905
annotation not available
     
 0.953
ENSCGOP00000033653
annotation not available
  
  
 
0.905
elp3
Elongator acetyltransferase complex subunit 3.
   
 
 0.885
elp5
Elongator acetyltransferase complex subunit 5.
   
 
 0.885
elp1
Elongator complex protein 1.
    
 
 0.884
LOC115005356
DPH3 homolog.
    
 
 0.834
elp4
Elongator acetyltransferase complex subunit 4.
   
 
 0.703
LOC115023473
DNA-directed RNA polymerase II subunit RPB1-like.
    
   0.686
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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