Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115013197Synapsin-1-like. (628 aa)    
Predicted Functional Partners:
syt1
Synaptotagmin 1.
   
 0.806
snap25
Synaptosome associated protein 25.
   
 0.731
ENSCGOP00000038604
annotation not available
   
 0.731
ENSCGOP00000010750
annotation not available
   
 
 0.722
ENSCGOP00000010759
annotation not available
   
 
 0.722
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.722
LOC115004002
Intersectin-2-like.
    
 
 0.705
itsn2
Intersectin 2.
    
 
 0.705
CASK
Peripheral plasma membrane protein CASK-like.
   
 0.685
CASK-2
Calcium/calmodulin dependent serine protein kinase.
   
 0.685
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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