Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115015527Jupiter microtubule associated homolog 1-like. (152 aa)    
Predicted Functional Partners:
trim33
Tripartite motif containing 33.
    
   0.659
LOC115010012
Transcription intermediary factor 1-alpha-like.
    
   0.659
LOC115028228
Transcription intermediary factor 1-alpha-like.
    
   0.659
jpt2
Jupiter microtubule associated homolog 2.
   
  
 0.653
ckap2l
Cytoskeleton associated protein 2 like.
      
 0.528
LOC115006260
Proteasomal ubiquitin receptor ADRM1-like.
      
 0.524
dnaaf3
Dynein axonemal assembly factor 3.
      
 0.463
fam32a
Family with sequence similarity 32 member A.
      
 0.441
rbm18
RNA binding motif protein 18.
      
 0.441
cbx5
Chromobox 5.
   
  
 0.405
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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