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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115013199Transcription cofactor vestigial-like protein 4. (270 aa)    
Predicted Functional Partners:
LOC115009320
Transcriptional enhancer factor TEF-1-like.
    
 
 0.717
LOC115008406
Transcriptional enhancer factor TEF-5-like.
    
 
 0.717
LOC115010775
Transcriptional enhancer factor TEF-5-like.
    
 
 0.717
TEAD1
TEA domain transcription factor 1.
    
 
 0.717
TEAD4
TEA domain transcription factor 4.
    
 
 0.717
LOC115003694
Interferon regulatory factor 2-binding protein 2-B-like.
    
 
 0.608
irf2bp2
Interferon regulatory factor 2 binding protein 2.
    
 
 0.608
LOC115017581
Interferon regulatory factor 2-binding protein 1-like.
    
 
 0.608
LOC115019350
Interferon regulatory factor 2-binding protein 1-like.
    
 
 0.608
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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