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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmt7Protein arginine methyltransferase 7. (686 aa)    
Predicted Functional Partners:
prmt5
Protein arginine methyltransferase 5.
   
 0.873
wdr77
WD repeat domain 77.
  
 0.810
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.765
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.753
eif2s2
Eukaryotic translation initiation factor 2 subunit beta.
   
 
 0.745
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
   0.740
rps24
Ribosomal protein S24.
   
  0.709
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.704
lss
Lanosterol synthase.
    
 0.703
tsr1
TSR1 ribosome maturation factor.
   
  0.703
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.