Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115025710Nucleobindin-2-like. (495 aa)    
Predicted Functional Partners:
LOC115024820
Extracellular serine/threonine protein kinase FAM20C-like.
    
 0.763
LOC115012424
Extracellular serine/threonine protein kinase FAM20C-like.
    
 0.763
ENSCGOP00000040428
annotation not available
      
 0.662
LOC115012724
Extracellular serine/threonine protein kinase FAM20C-like.
    
 0.652
nfu1
NFU1 iron-sulfur cluster scaffold.
    
 
 0.557
LOC115012216
Peptide YY-A-like.
      
 0.539
tmed10
Transmembrane p24 trafficking protein 10.
   
   0.533
LOC115024598
Peptide Y.
      
 0.525
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.507
ENSCGOP00000034386
annotation not available
     
  0.507
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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