Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pdia3Protein disulfide isomerase family A member 3. (490 aa)    
Predicted Functional Partners:
LOC115007043
Calreticulin-like.
   
 0.997
LOC115022065
Calreticulin-like.
   
 0.995
hspa5
Heat shock protein family A (Hsp70) member 5.
  
 0.989
hsp90b1
Heat shock protein 90 beta family member 1.
  
 0.980
ENSCGOP00000027422
annotation not available
    
 0.969
LOC115015922
Tapasin-like.
    
 0.935
LOC115016122
Tapasin-like.
    
 0.935
LOC115021787
Antigen peptide transporter 1-like.
  
 0.923
LOC115015924
Major histocompatibility complex class I-related gene protein-like.
   
 
  0.923
ppib
Peptidylprolyl isomerase B.
   
 0.918
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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