Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gen1GEN1 Holliday junction 5' flap endonuclease. (915 aa)    
Predicted Functional Partners:
eme1
Essential meiotic structure-specific endonuclease 1.
   
 0.903
rad50
RAD50 double strand break repair protein.
  
 0.873
ENSCGOP00000003527
annotation not available
  
 0.869
dna2
DNA replication helicase/nuclease 2.
   
 0.861
LOC115005922
DNA replication ATP-dependent helicase/nuclease DNA2-like.
   
 0.861
exo1
Exonuclease 1.
   
 
 0.855
rmi1
RecQ mediated genome instability 1.
   
 
 0.851
pcna
Proliferating cell nuclear antigen.
  
 0.846
mre11
MRE11 homolog, double strand break repair nuclease.
  
 0.841
LOC115023608
Structure-specific endonuclease subunit slx1-like.
     
 0.835
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.