Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC115021841Potassium channel subfamily K member 5-like. (444 aa)    
Predicted Functional Partners:
KCNJ15
Potassium inwardly rectifying channel subfamily J member 15.
      
 0.850
KCNK16
Potassium channel subfamily K member 16-like.
     
 0.846
kcnk18
Potassium two pore domain channel subfamily K member 18.
     
 0.791
ccdc189
Coiled-coil domain containing 189.
      
 0.683
cfap100
Cilia and flagella associated protein 100.
      
 0.683
smg8
SMG8 nonsense mediated mRNA decay factor.
      
 0.664
kcnk1
Potassium two pore domain channel subfamily K member 1.
     
 0.661
LOC115018999
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8-like.
      
 0.655
fkbp14
FKBP prolyl isomerase 14.
      
 0.647
LOC115027558
Potassium channel subfamily K member 3-like.
   
 
 0.644
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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