Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hhipl2HHIP like 2. (768 aa)    
Predicted Functional Partners:
LOC115012505
Hemoglobin subunit beta-like.
    
  0.500
wdr90
WD repeat domain 90.
    
   0.495
LOC115025633
netrin-G1-like.
    
 0.450
ENSCGOP00000021639
annotation not available
    
 0.450
LOC115021958
netrin-G1-like.
    
 0.450
rad50
RAD50 double strand break repair protein.
    
 0.431
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.429
hsp90b1
Heat shock protein 90 beta family member 1.
    
  0.428
mre11
MRE11 homolog, double strand break repair nuclease.
    
  0.416
ENSCGOP00000049893
Haptoglobin.
    
 0.411
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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