Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrps10Mitochondrial ribosomal protein S10. (204 aa)    
Predicted Functional Partners:
mrps16
Mitochondrial ribosomal protein S16.
  
 0.999
mrps11
Mitochondrial ribosomal protein S11.
  
 0.999
dap3
Death associated protein 3.
   
 0.999
ENSCGOP00000018278
Mitochondrial ribosomal protein S5.
  
 0.999
mrps22
Mitochondrial ribosomal protein S22.
   
 0.999
mrps7
Mitochondrial ribosomal protein S7.
  
 0.999
mrps9
Mitochondrial ribosomal protein S9.
  
 0.999
mrps15
Mitochondrial ribosomal protein S15.
  
 0.999
LOC115021222
28S ribosomal protein S12, mitochondrial-like.
  
 0.999
mrps14
Mitochondrial ribosomal protein S14.
  
 0.999
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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