Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem268Transmembrane protein 268. (362 aa)    
Predicted Functional Partners:
LOC115005825
Transmembrane protein 266-like.
      
 0.725
tmem266
Transmembrane protein 266.
      
 0.725
LOC115011144
Solute carrier family 2, facilitated glucose transporter member 9-like.
      
 0.704
ENSCGOP00000012949
Potassium voltage-gated channel, Isk-related family, member 4.
      
 0.641
LOC115026829
Immunoglobulin-like domain-containing receptor 1.
      
 0.640
SH3RF1
SH3 domain containing ring finger 1.
      
 0.606
ENSCGOP00000032818
Solute carrier family 35 member F4.
      
 0.585
slc35f4
Solute carrier family 35 member F4.
      
 0.585
cdh23
Cadherin related 23.
      
 0.580
LOC115019362
Cationic amino acid transporter 3-like.
      
 0.576
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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