Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115005942Pleckstrin homology domain-containing family A member 7-like. (1298 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 0.836
pdzd11
PDZ domain containing 11.
    
 0.772
rps27a
Ribosomal protein S27a.
    
  0.715
tspan33
Tetraspanin 33.
    
 0.703
lats2
Large tumor suppressor kinase 2.
    
 0.693
lats1
Large tumor suppressor kinase 1.
    
 0.693
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.677
LOC115019207
14-3-3 protein epsilon.
    
 0.638
LOC115017554
14-3-3 protein epsilon-like.
    
 0.638
ptpn23
Protein tyrosine phosphatase non-receptor type 23.
    
 0.637
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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