Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115021843Serum paraoxonase/arylesterase 2-like. (395 aa)    
Predicted Functional Partners:
LOC115021251
Serum paraoxonase/arylesterase 2-like.
   
  0.973
nfyc
Nuclear transcription factor Y subunit gamma.
    
   0.909
lcat
Lecithin-cholesterol acyltransferase.
   
  
 0.713
ENSCGOP00000049893
Haptoglobin.
   
  
 0.666
LOC115015503
Apolipoprotein Eb-like.
   
  
 0.654
mgst1
Microsomal glutathione S-transferase 1.
   
  
 0.627
apof
Apolipoprotein F.
   
  
 0.608
chrac1
Chromatin accessibility complex subunit 1.
    
   0.578
LOC115021497
Apolipoprotein A-I-like.
      
 0.528
LOC115021499
Apolipoprotein A-IV-like.
      
 0.528
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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