Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115010318Anillin-like. (910 aa)    
Predicted Functional Partners:
LOC115008921
Rac GTPase-activating protein 1-like.
   
 
 0.951
racgap1
Rac GTPase activating protein 1.
   
 
 0.951
incenp
Inner centromere protein.
   
 
 0.947
KIF23
Kinesin family member 23.
   
 
 0.942
LOC115010281
Kinesin-like protein KIF23.
   
 
 0.942
kif11
Kinesin family member 11.
   
 
 0.924
ENSCGOP00000030217
Centrosomal protein 55 like.
   
 
 0.922
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 
 0.921
ect2
Epithelial cell transforming 2.
   
 
 0.920
LOC115008192
Citron Rho-interacting kinase-like.
   
 0.914
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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