Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115012060Transmembrane protein 56-B-like. (259 aa)    
Predicted Functional Partners:
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.705
ccdc189
Coiled-coil domain containing 189.
    
 
 0.644
ENSCGOP00000029414
annotation not available
    
 
 0.644
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.614
pum1
Pumilio RNA binding family member 1.
    
   0.561
pum2
Pumilio RNA binding family member 2.
    
   0.561
rgs7bp
Regulator of G protein signaling 7 binding protein.
      
 0.503
LOC115005883
Alpha-aspartyl dipeptidase-like.
      
 0.493
nrip2
Nuclear receptor interacting protein 2.
      
 0.473
ercc6l
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
   
 
 0.471
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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