STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115017017Eosinophil peroxidase-like. (723 aa)    
Predicted Functional Partners:
LOC115006752
Cytosolic phospholipase A2-like.
   
 
 0.831
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.831
got2
Glutamic-oxaloacetic transaminase 2.
    
 0.694
pah
Phenylalanine hydroxylase.
     
 0.674
got1
Glutamic-oxaloacetic transaminase 1.
    
 0.594
LOC115013666
Aspartate aminotransferase, cytoplasmic-like.
    
 0.594
pla2g6
Phospholipase A2 group VI.
   
 0.593
cat
Catalase.
    
 0.584
th
Tyrosine hydroxylase.
     
 0.580
LOC115028288
Tyrosine 3-monooxygenase-like.
     
 0.580
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.