Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115013497E3 ubiquitin/ISG15 ligase TRIM25-like. (732 aa)    
Predicted Functional Partners:
ENSCGOP00000007602
annotation not available
     
 
0.900
ENSCGOP00000015929
annotation not available
     
 
0.900
dhx58
DExH-box helicase 58.
    
 0.700
LOC115024497
Interferon regulatory factor 3-like.
   
 0.697
ifih1
Interferon induced with helicase C domain 1.
   
 0.678
DTX1
Deltex E3 ubiquitin ligase 1.
      
 0.670
casp6
Caspase 6.
    
 0.657
irf5
Interferon regulatory factor 5.
    
 0.647
irf7
Interferon regulatory factor 7.
   
 0.554
ENSCGOP00000048404
annotation not available
    
 0.530
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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