Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r27Protein phosphatase 1 regulatory subunit 27. (168 aa)    
Predicted Functional Partners:
LOC115012338
Protein disulfide-isomerase-like.
    
 
 0.753
ENSCGOP00000014234
Protein phosphatase 1, catalytic subunit, alpha isozyme a.
  
 0.713
ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
  
 0.713
LOC115024308
Serine/threonine-protein phosphatase alpha-2 isoform-like.
  
 0.713
PPP1CB
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
  
 0.713
ppp1cb
Protein phosphatase 1 catalytic subunit beta.
  
 0.713
ldah
Lipid droplet associated hydrolase.
    
   0.576
LOC115004508
Protein disulfide-isomerase A3-like.
    
 
 0.555
sirt7
Sirtuin 7.
    
 0.548
ENDOV
Endonuclease V.
      
 0.507
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.