Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zfpl1Zinc finger protein like 1. (329 aa)    
Predicted Functional Partners:
vapa
VAMP associated protein A.
   
 
 0.802
LOC115008555
Vesicle-associated membrane protein-associated protein B-like.
   
 
 0.802
LOC115024349
acyl-CoA-binding domain-containing protein 4-like.
    
   0.760
acbd5
acyl-CoA binding domain containing 5.
    
   0.760
ENSCGOP00000040404
annotation not available
    
   0.760
ENSCGOP00000040405
annotation not available
    
   0.760
tm9sf3
Transmembrane 9 superfamily member 3.
      
 0.746
fam91a1
Family with sequence similarity 91 member A1.
      
 0.727
LOC115010749
Vesicle-associated membrane protein-associated protein B/C-like.
   
 
 0.696
PITPNM2
Membrane-associated phosphatidylinositol transfer protein 2-like.
    
 
 0.695
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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