Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115008007SLIT-ROBO Rho GTPase-activating protein 3-like. (1102 aa)    
Predicted Functional Partners:
LOC115004002
Intersectin-2-like.
   
 0.813
itsn2
Intersectin 2.
   
 0.813
LOC115020435
Intersectin-1-like.
   
 0.682
pak2
P21 (RAC1) activated kinase 2.
    
 0.651
LOC115016484
Rho-related GTP-binding protein RhoF-like.
    
 0.645
wasl
WASP like actin nucleation promoting factor.
   
 0.641
LOC115009210
Neural Wiskott-Aldrich syndrome protein-like.
   
 0.641
LOC115010837
wiskott-Aldrich syndrome protein-like.
   
 0.641
nckipsd
NCK interacting protein with SH3 domain.
    
 
 0.639
LOC115008836
Cell division control protein 42 homolog.
    
 0.632
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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