Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cacnb2Calcium voltage-gated channel auxiliary subunit beta 2. (695 aa)    
Predicted Functional Partners:
cacna2d1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.874
LOC115028087
Voltage-dependent calcium channel subunit alpha-2/delta-1-like.
   
 0.874
cacna2d2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
   
 0.857
LOC115008089
Voltage-dependent calcium channel subunit alpha-2/delta-2-like.
   
 0.857
LOC115007829
Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like.
   
 0.833
LOC115010609
Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like.
   
 0.833
cacna1f
Calcium voltage-gated channel subunit alpha1 F.
   
 0.833
LOC115005436
Voltage-dependent L-type calcium channel subunit alpha-1D-like.
   
 0.833
cacna1c
Calcium voltage-gated channel subunit alpha1 C.
   
 0.833
cacna1d
Calcium voltage-gated channel subunit alpha1 D.
   
 0.833
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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