Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kctd5Potassium channel tetramerization domain containing 5. (224 aa)    
Predicted Functional Partners:
LOC115018021
Cullin-3.
    
 0.864
CUL3
Cullin-3-like.
    
 0.864
kctd2
Potassium channel tetramerization domain containing 2.
    
 
 0.849
dmc1
DNA meiotic recombinase 1.
    
   0.814
cacul1
CDK2 associated cullin domain 1.
    
 0.731
LOC115013039
BTB/POZ domain-containing protein KCTD9.
    
 
 0.712
LOC115017193
BTB/POZ domain-containing protein KCTD9-like.
    
 
 0.712
LOC115013564
Arrestin domain-containing protein 1-like.
    
   0.667
arrdc1
Arrestin domain containing 1.
    
   0.667
LOC115006300
Mucin-17-like.
      
 0.655
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.