Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115016775Growth arrest and DNA damage-inducible protein GADD45 gamma-like. (172 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen.
    
 0.978
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
 0.970
LOC115017921
Cyclin N-terminal domain-containing protein 2-like.
    
  0.909
LOC115006426
G2/mitotic-specific cyclin-B2-like.
    
  0.909
LOC115017178
G2/mitotic-specific cyclin-B1-like.
    
  0.909
LOC115023713
Cellular tumor antigen p53-like.
     
 0.900
cdk1
Cyclin dependent kinase 1.
    
  0.707
cnot9
CCR4-NOT transcription complex subunit 9.
    
   0.584
cnot10
CCR4-NOT transcription complex subunit 10.
    
   0.580
cnot1
CCR4-NOT transcription complex subunit 1.
    
   0.575
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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