Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptpn21Protein tyrosine phosphatase non-receptor type 21. (1239 aa)    
Predicted Functional Partners:
LOC115016276
Partitioning defective 6 homolog gamma-like.
    
 
 0.850
pard6b
Par-6 family cell polarity regulator beta.
    
 
 0.850
yap1
Yes associated protein 1.
   
 
 0.833
rhpn2
Rhophilin Rho GTPase binding protein 2.
    
 
 0.791
rhpn1
Rhophilin Rho GTPase binding protein 1.
    
 
 0.791
ENSCGOP00000012855
annotation not available
    
 0.697
LOC115012209
Growth factor receptor-bound protein 2.
    
 0.697
ENSCGOP00000003187
annotation not available
    
 
 0.674
pts
6-pyruvoyltetrahydropterin synthase.
    
 
 0.674
ptpn23
Protein tyrosine phosphatase non-receptor type 23.
   
 0.673
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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