Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
arhgap42Rho GTPase activating protein 42. (882 aa)    
Predicted Functional Partners:
arhgap10
Rho GTPase activating protein 10.
    
   0.724
c2cd2
C2 calcium dependent domain containing 2.
    
   0.687
LOC115008836
Cell division control protein 42 homolog.
    
 0.620
CDC42
Cell division control protein 42 homolog.
    
 0.620
LOC115010688
Rho-related GTP-binding protein RhoA-B-like.
    
 0.581
LOC115010790
Rho-related GTP-binding protein RhoA-C-like.
    
 0.581
LOC115017526
Rho-related GTP-binding protein RhoA-C.
    
 0.581
LOC115010789
Rho-related GTP-binding protein RhoA-D.
    
 0.581
SNIP1
Smad nuclear interacting protein 1.
      
 0.581
LOC115008052
Rho-related GTP-binding protein RhoA-B.
    
 0.581
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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