ENSCGOP00000012656 protein (Cottoperca gobio)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCGOP00000012656

annotation not available (601 aa)

Predicted Functional Partners:

LOC115026096

0.598

mysm1

0.560

mrps11

0.429

mrps9

0.423

ENSCGOP00000055941

0.422

chchd1

0.417

mrps33

0.415

mrps26

0.415

dap3

0.413

ENSCGOP00000018278

0.412

Your Current Organism:

Cottoperca gobio

NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCGOP00000012656	ENSCGOP00000018278	ENSCGOP00000012656	ENSCGOP00000018278	annotation not available	Mitochondrial ribosomal protein S5.	0.412
ENSCGOP00000012656	ENSCGOP00000055941	ENSCGOP00000012656	ENSCGOP00000055941	annotation not available	Mitochondrial ribosomal protein S6.	0.422
ENSCGOP00000012656	LOC115026096	ENSCGOP00000012656	ENSCGOP00000056975	annotation not available	Thioredoxin domain-containing protein 3 homolog.	0.598
ENSCGOP00000012656	chchd1	ENSCGOP00000012656	ENSCGOP00000030926	annotation not available	Coiled-coil-helix-coiled-coil-helix domain containing 1.	0.417
ENSCGOP00000012656	dap3	ENSCGOP00000012656	ENSCGOP00000013387	annotation not available	Death associated protein 3.	0.413
ENSCGOP00000012656	mrps11	ENSCGOP00000012656	ENSCGOP00000001552	annotation not available	Mitochondrial ribosomal protein S11.	0.429
ENSCGOP00000012656	mrps26	ENSCGOP00000012656	ENSCGOP00000052024	annotation not available	Mitochondrial ribosomal protein S26.	0.415
ENSCGOP00000012656	mrps33	ENSCGOP00000012656	ENSCGOP00000006371	annotation not available	Mitochondrial ribosomal protein S33.	0.415
ENSCGOP00000012656	mrps9	ENSCGOP00000012656	ENSCGOP00000030253	annotation not available	Mitochondrial ribosomal protein S9.	0.423
ENSCGOP00000012656	mysm1	ENSCGOP00000012656	ENSCGOP00000000481	annotation not available	Myb like, SWIRM and MPN domains 1.	0.560
ENSCGOP00000018278	ENSCGOP00000012656	ENSCGOP00000018278	ENSCGOP00000012656	Mitochondrial ribosomal protein S5.	annotation not available	0.412
ENSCGOP00000018278	ENSCGOP00000055941	ENSCGOP00000018278	ENSCGOP00000055941	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S6.	0.999
ENSCGOP00000018278	LOC115026096	ENSCGOP00000018278	ENSCGOP00000056975	Mitochondrial ribosomal protein S5.	Thioredoxin domain-containing protein 3 homolog.	0.866
ENSCGOP00000018278	chchd1	ENSCGOP00000018278	ENSCGOP00000030926	Mitochondrial ribosomal protein S5.	Coiled-coil-helix-coiled-coil-helix domain containing 1.	0.995
ENSCGOP00000018278	dap3	ENSCGOP00000018278	ENSCGOP00000013387	Mitochondrial ribosomal protein S5.	Death associated protein 3.	0.999
ENSCGOP00000018278	mrps11	ENSCGOP00000018278	ENSCGOP00000001552	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S11.	0.999
ENSCGOP00000018278	mrps26	ENSCGOP00000018278	ENSCGOP00000052024	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S26.	0.999
ENSCGOP00000018278	mrps33	ENSCGOP00000018278	ENSCGOP00000006371	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S33.	0.999
ENSCGOP00000018278	mrps9	ENSCGOP00000018278	ENSCGOP00000030253	Mitochondrial ribosomal protein S5.	Mitochondrial ribosomal protein S9.	0.999
ENSCGOP00000018278	mysm1	ENSCGOP00000018278	ENSCGOP00000000481	Mitochondrial ribosomal protein S5.	Myb like, SWIRM and MPN domains 1.	0.682