Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115008541Krueppel-like factor 15. (423 aa)    
Predicted Functional Partners:
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.598
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.560
gtf3c3
General transcription factor IIIC subunit 3.
    
 0.444
mrps11
Mitochondrial ribosomal protein S11.
    
  0.429
ruvbl1
RuvB like AAA ATPase 1.
    
  0.425
mrps9
Mitochondrial ribosomal protein S9.
    
  0.423
ENSCGOP00000055941
Mitochondrial ribosomal protein S6.
    
  0.422
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
  0.417
mrps33
Mitochondrial ribosomal protein S33.
    
  0.415
mrps26
Mitochondrial ribosomal protein S26.
    
  0.415
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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