Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115015638Sperm-associated antigen 1A-like. (393 aa)    
Predicted Functional Partners:
ruvbl1
RuvB like AAA ATPase 1.
   
 0.915
ruvbl2
RuvB like AAA ATPase 2.
    
 
 0.867
ENSCGOP00000036958
annotation not available
 
     
0.851
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.792
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
   
 0.782
wdr92
WD repeat domain 92.
    
 0.769
ENSCGOP00000047563
PIH1 domain containing 2.
    
 
 0.750
lrrc6
Leucine rich repeat containing 6.
    
 
 0.687
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.680
zmynd10
Zinc finger MYND-type containing 10.
   
 0.661
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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