Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC115007100Protein-lysine 6-oxidase-like. (556 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.546
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.533
LOC115017895
Transforming growth factor beta-1 proprotein-like.
    
 0.494
wdr90
WD repeat domain 90.
    
 0.487
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.484
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.447
LOC115014529
E3 ubiquitin-protein ligase NEURL1-like.
    
  0.429
LOC115020427
E3 ubiquitin-protein ligase NEURL1-like.
    
  0.429
neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
    
  0.429
bgn
Biglycan.
   
 0.423
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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