Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc1a3Solute carrier family 1 member 3. (543 aa)    
Predicted Functional Partners:
cldn19
Claudin 19.
      
 0.739
srgap3
SLIT-ROBO Rho GTPase activating protein 3.
     
 0.715
mustn1
Musculoskeletal, embryonic nuclear protein 1.
     
 0.654
slc7a5
Solute carrier family 7 member 5.
  
 
 0.648
blmh
Bleomycin hydrolase.
      
 0.647
med19
Mediator complex subunit 19.
      
 0.641
ENSCGOP00000009203
Connexin 43.
     
 0.586
slc3a1
Solute carrier family 3 member 1.
  
 
 0.578
hmgcr
3-hydroxy-3-methylglutaryl-CoA reductase.
     
 0.560
slc38a9
Solute carrier family 38 member 9.
      
 0.519
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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