Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snx24Sorting nexin 24. (172 aa)    
Predicted Functional Partners:
ENSCGOP00000004553
annotation not available
    
   0.969
gapvd1
GTPase activating protein and VPS9 domains 1.
    
 
 0.962
csnk1a1
Casein kinase 1 alpha 1.
    
   0.899
ENSCGOP00000047934
Zinc finger protein 618.
    
   0.847
gmcl1
Germ cell-less 1, spermatogenesis associated.
      
 0.831
TSSK2
Testis specific serine kinase 2.
    
   0.808
slc35e4
Solute carrier family 35 member E4.
      
 0.762
fam136a
Family with sequence similarity 136 member A.
      
 0.757
ggcx
Gamma-glutamyl carboxylase.
      
 0.754
LOC115017104
Prenylcysteine oxidase-like.
      
 0.726
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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