Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115017542Programmed cell death protein 10-like. (210 aa)    
Predicted Functional Partners:
LOC115003701
Cerebral cavernous malformations protein 2 homolog.
    
 0.995
LOC115025980
MOB-like protein phocein.
   
 
 0.931
slmap
Sarcolemma associated protein.
    
 
 0.924
LOC115011292
TRAF3-interacting JNK-activating modulator-like.
    
 
 0.918
LOC115027448
Programmed cell death protein 10.
  
  
 
0.901
cttnbp2nl
CTTNBP2 N-terminal like.
    
 
 0.899
LOC115007783
CTTNBP2 N-terminal-like protein.
    
 
 0.899
fgfr1op2
FGFR1 oncogene partner 2.
   
 
 0.898
LOC115017387
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 
 0.878
LOC115008735
Striatin-interacting protein 1 homolog.
    
 
 0.860
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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