Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pax7Paired box 7. (502 aa)    
Predicted Functional Partners:
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.827
ctnnb1
Catenin beta 1.
    
 0.798
LOC115009162
Transcription factor SOX-10-like.
   
 0.714
sox10
SRY-box transcription factor 10.
   
 0.713
myog
Myogenin.
   
 
 0.713
sdhd
Succinate dehydrogenase complex subunit D.
    
 0.684
lef1
Lymphoid enhancer binding factor 1.
    
 0.684
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.679
LOC115022031
Cactin-like.
    
 0.668
zbtb48
Zinc finger and BTB domain containing 48.
    
 0.642
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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