Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115024174Sodium channel protein type 4 subunit alpha A-like. (1903 aa)    
Predicted Functional Partners:
LOC115020976
Sodium channel subunit beta-1-like.
    
 0.966
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.925
LOC115015591
Sodium channel subunit beta-1-like.
    
 0.925
LOC115017294
Sodium channel subunit beta-4-like.
    
 0.865
scn3b
Sodium voltage-gated channel beta subunit 3.
    
 0.832
ENSCGOP00000023173
Potassium voltage-gated channel, shaker-related subfamily, member 7.
    
 
 0.780
LOC115022139
Sodium/potassium-transporting ATPase subunit alpha-2-like.
    
 
 0.733
IFT122
Intraflagellar transport 122.
   
 0.728
LOC115005895
Sodium channel protein type 5 subunit alpha-like.
  
 
0.728
LOC115026528
Sodium channel protein type 2 subunit alpha-like.
  
 
0.726
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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