Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spata7Spermatogenesis associated 7. (605 aa)    
Predicted Functional Partners:
LOC115021630
Cytochrome b5 reductase 4.
    
   0.801
rd3
Retinal degeneration 3, GUCY2D regulator.
      
 0.774
ENSCGOP00000043293
annotation not available
   
 
 0.771
ENSCGOP00000043295
annotation not available
   
 
 0.771
lrat
Lecithin retinol acyltransferase.
      
 0.750
ttc8
Tetratricopeptide repeat domain 8.
   
  
 0.748
vps54
VPS54 subunit of GARP complex.
    
   0.741
nphp1
Nephrocystin 1.
    
 
 0.737
lca5
Lebercilin LCA5.
      
 0.730
cep290
Centrosomal protein 290.
      
 0.728
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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