STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115013198Sodium-dependent phosphate transporter 1-A-like. (633 aa)    
Predicted Functional Partners:
slc13a4
Solute carrier family 13 member 4.
  
 
 0.534
slc12a3
Solute carrier family 12 member 3.
     
 0.533
flad1
Flavin adenine dinucleotide synthetase 1.
  
  
 0.517
kars1
lysyl-tRNA synthetase 1.
  
    0.513
trpm7
Transient receptor potential cation channel subfamily M member 7.
      
 0.509
ENSCGOP00000023806
annotation not available
      
 0.450
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.446
gale
UDP-galactose-4-epimerase.
     
 0.435
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
  
 0.426
oca2
OCA2 melanosomal transmembrane protein.
  
  
 0.421
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.