STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115011820ATP-sensitive inward rectifier potassium channel 12-like. (458 aa)    
Predicted Functional Partners:
LOC115021144
Inward rectifier potassium channel 2-like.
  
  
 
0.814
kcnq1
Potassium voltage-gated channel subfamily Q member 1.
   
 
 0.765
ENSCGOP00000051435
annotation not available
   
 
 0.765
LOC115028338
Guanine nucleotide-binding protein subunit beta-5b-like.
    
  0.730
gnb5
G protein subunit beta 5.
    
  0.730
LOC115012785
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.
   
  0.726
LOC115006119
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2.
    
  0.719
ENSCGOP00000011421
annotation not available
    
  0.719
GNG4
G protein subunit gamma 4.
    
  0.719
GNG5
G protein subunit gamma 5.
    
  0.709
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.