STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa2013KIAA2013 ortholog. (620 aa)    
Predicted Functional Partners:
LOC115024968
V-type proton ATPase subunit d 1.
    
   0.663
LOC115011465
V-type proton ATPase subunit S1-like.
    
   0.631
LOC115010799
V-type proton ATPase subunit S1-like.
    
   0.631
ENSCGOP00000038398
ATPase H+ transporting accessory protein 1a.
    
   0.631
LOC115022943
V-type proton ATPase subunit d 1-like.
    
   0.621
atp6ap1l
ATPase H+ transporting accessory protein 1 like.
    
   0.608
ENSCGOP00000043904
Vacuolar ATPase assembly factor VMA21.
   
   0.598
atp6ap2
ATPase H+ transporting accessory protein 2.
    
   0.589
LOC115014474
V-type proton ATPase 116 kDa subunit a-like.
    
   0.579
LOC115017066
V-type proton ATPase 116 kDa subunit a-like.
    
   0.579
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.