STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb2Zinc finger and BTB domain containing 2. (530 aa)    
Predicted Functional Partners:
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.682
ENSCGOP00000036216
annotation not available
    
  0.607
bard1
BRCA1 associated RING domain 1.
    
  0.581
YTHDC2
YTH domain containing 2.
    
  0.564
setbp1
SET binding protein 1.
  
  0.533
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.523
mrps11
Mitochondrial ribosomal protein S11.
   
  0.522
LOC115021222
28S ribosomal protein S12, mitochondrial-like.
    
  0.519
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
  0.517
mrps16
Mitochondrial ribosomal protein S16.
   
  0.516
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.