STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115017410Alpha-2-macroglobulin-like. (1406 aa)    
Predicted Functional Partners:
LOC115012434
Chromobox protein homolog 8-like.
    
 0.854
cbx8
Chromobox 8.
    
 0.854
rnf2
Ring finger protein 2.
    
 0.848
RING1
Ring finger protein 1.
    
 0.848
pcgf2
Polycomb group ring finger 2.
    
 0.843
bmi1
BMI1 proto-oncogene, polycomb ring finger.
    
 0.843
c9
Complement C9.
   
 0.829
LOC115012777
E3 SUMO-protein ligase CBX4-like.
    
 0.765
cbx4
Chromobox 4.
    
 0.765
ENSCGOP00000023836
annotation not available
    
 0.765
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.