STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115021595Nuclear receptor subfamily 0 group B member 2-like. (258 aa)    
Predicted Functional Partners:
LOC115013309
Steroidogenic factor 1-like.
   
0.892
nr5a2
Nuclear receptor subfamily 5 group A member 2.
   
0.892
med1
Mediator complex subunit 1.
    
 0.758
ncor1
Nuclear receptor corepressor 1.
    
 0.758
ncor2
Nuclear receptor corepressor 2.
    
 0.758
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.751
PPARA
Peroxisome proliferator-activated receptor alpha-like.
   
 0.748
hnf4a
Hepatocyte nuclear factor 4 alpha.
   
0.741
LOC115025785
Hepatocyte nuclear factor 4-gamma-like.
   
0.741
nr1h4
Nuclear receptor subfamily 1 group H member 4.
   
 
 0.654
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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