STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115015333Potassium voltage-gated channel subfamily G member 2-like. (540 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.969
rpl31
Ribosomal protein L31.
   
 0.873
rpl30
Ribosomal protein L30.
   
 0.868
rpl23a
Ribosomal protein L23a.
  
 0.868
rpl35
60S ribosomal protein L35.
  
 0.864
ENSCGOP00000040490
Ribosomal protein L29.
   
 0.864
rpl34
Ribosomal protein L34.
  
 0.863
rpl24
Ribosomal protein L24.
  
 0.862
rpl32
Ribosomal protein L32.
  
 0.860
rpl21
Ribosomal protein L21.
  
 0.858
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.