STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115011955Cytochrome P450 2K1-like. (505 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.852
asmtl
Acetylserotonin O-methyltransferase like.
     
 0.843
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.818
LOC115021630
Cytochrome b5 reductase 4.
   
 0.773
LOC115006752
Cytosolic phospholipase A2-like.
    
  0.744
pla2g4a
Phospholipase A2 group IVA.
    
  0.744
LOC115023704
Cytochrome P450 26B1.
  
 0.729
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 0.697
palb2
Partner and localizer of BRCA2.
  
 0.697
LOC115005541
Cytochrome P450 26C1.
  
  
  0.682
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.