STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc4DnaJ heat shock protein family (Hsp40) member C4. (239 aa)    
Predicted Functional Partners:
ndufa9
NADH:ubiquinone oxidoreductase subunit A9.
    
  0.553
tmem254
Transmembrane protein 254.
    
  0.540
LOC115013115
Flavin reductase (NADPH)-like.
    
  0.540
blvrb
Biliverdin reductase B.
    
  0.540
htatip2
HIV-1 Tat interactive protein 2.
    
  0.513
LOC115011095
dnaJ homolog subfamily C member 11-like.
    
 
 0.510
LOC115010650
Proliferation-associated protein 2G4-like.
    
  0.477
pa2g4
Proliferation-associated 2G4.
    
  0.477
gak
Cyclin G associated kinase.
    
 
 0.472
dnajc24
DnaJ heat shock protein family (Hsp40) member C24.
    
 
 0.452
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.